Structure of PDB 5xt8 Chain A

Receptor sequence
>5xt8A (length=197) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence]
PGLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGGLPEVRSLL
LTQELSPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQG
YGRGLPLPWLREVAREATRGLKPRLTFLLDLPPEAALRRVRRPDRLEGLG
LEFFRRVREGYLALARAEPGRFVVLDATLPEEEIARAIQAHLRPLLP
3D structure
PDB5xt8 Structural and functional roles of dynamically correlated residues in thymidylate kinase.
ChainA
Resolution2.01 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.9: dTMP kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A Y62 S66 R69 A115 Y61 S65 R68 A114
BS02 MG A T7 E9 D94 T127 T6 E8 D93 T126
BS03 MG A Q19 L23 Q18 L22
BS04 MG A G15 T17 T18 G14 T16 T17
Gene Ontology
Molecular Function
GO:0004798 thymidylate kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
Biological Process
GO:0006227 dUDP biosynthetic process
GO:0006233 dTDP biosynthetic process
GO:0006235 dTTP biosynthetic process
GO:0009165 nucleotide biosynthetic process
GO:0016310 phosphorylation
GO:0046940 nucleoside monophosphate phosphorylation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:5xt8, PDBe:5xt8, PDBj:5xt8
PDBsum5xt8
PubMed29652261
UniProtQ5SHX3|KTHY_THET8 Thymidylate kinase (Gene Name=tmk)

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