Structure of PDB 5xnd Chain A

Receptor sequence
>5xndA (length=110) Species: 13676 (Scomber japonicus) [Search protein sequence]
SMAFASVLKDAEVTAALDGCKAAGSFDHKKFFKACGLSGKSTDEVKKAFA
IIDQDKSGFIEEEELKLFLQNFKAGARALSDAETKAFLKAGDSDGDGKIG
IDEFAAMIKG
3D structure
PDB5xnd Solution structure of the major fish allergen parvalbumin Sco j 1 derived from the Pacific mackerel
ChainA
ResolutionN/A
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D52 D54 S56 F58 E63 D53 D55 S57 F59 E64
BS02 CA A D91 D93 D95 K97 E102 D92 D94 D96 K98 E103
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5xnd, PDBe:5xnd, PDBj:5xnd
PDBsum5xnd
PubMed29215073
UniProtP59747|PRVB_SCOJP Parvalbumin beta

[Back to BioLiP]