Structure of PDB 5x0j Chain A

Receptor sequence
>5x0jA (length=241) Species: 69014 (Thermococcus kodakarensis KOD1) [Search protein sequence]
GVEKVPKYDIPTKKVDYVFIELDKMKPHQQLVQKELEAFIESVTGSGIFW
KPMLLAKVPGEDMYLIVDGHHRWAGLQKLGAKRAPSVILDYFSDDVKVYT
WYPAFKGDLNEVVERLKKEGLEVIEDPEAEEKAERGEIAFALVGEKSFAI
PGGLEEQKKVSKVLDEMSVEGKIELIYYGLKEDAREDMAKGEIDYVFIRK
APTKEEVMELVKRGEVYSPKTTRHVLPFNPDKIDVKLEELF
3D structure
PDB5x0j Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ChainA
Resolution1.43 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.1.226: L-serine kinase (ADP).
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 AMP A F40 S43 I49 F50 W51 K52 G70 H71 H72 R73 F39 S42 I48 F49 W50 K51 G69 H70 H71 R72
BS02 SEP A Q30 V68 D69 H71 H72 W102 K221 T223 R224 H225 Q29 V67 D68 H70 H71 W101 K220 T222 R223 H224
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016301 kinase activity
Biological Process
GO:0016310 phosphorylation
GO:0019344 cysteine biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5x0j, PDBe:5x0j, PDBj:5x0j
PDBsum5x0j
PubMed28358477
UniProtQ5JD03|SERK_THEKO L-serine kinase SerK (Gene Name=serK)

[Back to BioLiP]