Structure of PDB 5x0g Chain A

Receptor sequence
>5x0gA (length=239) Species: 69014 (Thermococcus kodakarensis KOD1) [Search protein sequence]
VEKVPKYDIPTKKVDYVFIELDKMKPHAQLVQKELEAFIESVTGSGIFWK
PMLLAKVPGEDMYLIVDGHHRWAGLQKLGAKRAPSVILDYFSDDVKVYTW
YPAFKGDLNEVVERLKKEGLEVIEDPEAEEKAERGEIAFALVGEKSFAIP
GGLEEQKKVSKVLDEMSVEGKIELIYYGLKEDAREDMAKGIDYVFIRKAP
TKEEVMELVKRGEVYSPKTTRHVLPFNPDKIDVKLEELF
3D structure
PDB5x0g Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis
ChainA
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.1.226: L-serine kinase (ADP).
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 AMP A F40 S43 I49 F50 W51 K52 G70 H72 R73 F38 S41 I47 F48 W49 K50 G68 H70 R71
BS02 ADP A F40 S43 I49 F50 W51 K52 D69 G70 H71 H72 R73 F38 S41 I47 F48 W49 K50 D67 G68 H69 H70 R71
BS03 7WF A D17 Y18 V19 F20 D15 Y16 V17 F18
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016301 kinase activity
Biological Process
GO:0016310 phosphorylation
GO:0019344 cysteine biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5x0g, PDBe:5x0g, PDBj:5x0g
PDBsum5x0g
PubMed28358477
UniProtQ5JD03|SERK_THEKO L-serine kinase SerK (Gene Name=serK)

[Back to BioLiP]