Structure of PDB 5vgd Chain A

Receptor sequence
>5vgdA (length=273) Species: 9606 (Homo sapiens) [Search protein sequence]
SHSMRYFYTAVSRPGRGEPRFIAVGYVDDTQFVQFDSDAASPRGEPRAPW
VEQEGPEYWDRETQKYKRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGC
DLGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADKAAQITQRKWEAAR
EAEQRRAYLEGTCVEWLRRYLENGKKTLQRAEHPKTHVTHHPVSDHEATL
RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPS
GEEQRYTCHVQHEGLPEPLTLRW
3D structure
PDB5vgd Structural and regulatory diversity shape HLA-C protein expression levels.
ChainA
Resolution2.32 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E63 K66 R69 Q70 T73 N77 K80 L81 Y84 R97 Y99 F116 T143 K146 W147 R156 Y159 W167 Y171 Y6 E62 K65 R68 Q69 T72 N76 K79 L80 Y83 R96 Y98 F115 T142 K145 W146 R155 Y158 W166 Y170
External links
PDB RCSB:5vgd, PDBe:5vgd, PDBj:5vgd
PDBsum5vgd
PubMed28649982
UniProtP10321|HLAC_HUMAN HLA class I histocompatibility antigen, C alpha chain (Gene Name=HLA-C)

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