Structure of PDB 5vgc Chain A

Receptor sequence
>5vgcA (length=211) Species: 564886 (Enterobacteria phage YYZ-2008) [Search protein sequence]
VDLTPYILPGVSFLSDIPQETLSEIRNQTIRGEAQIRLGELMVSIRPMQV
NGYFMGSLNQDGLSNDNIQIGLQYIEHIERTLNHGSLTSREVTVLREIEM
LENMDLLSNYQLEELLDKIEVCAFNVEHAQLQVPESLRTCPVTLCEPEDG
VFMRNSMNSNVCMLYDKMALIHLVKTRAAHPLSRESIAVSMIVGRDNAAF
DPDRGNFVLKN
3D structure
PDB5vgc Crystal structure of the NleG5-1 effector (C200A) from Escherichia coli O157:H7 str. Sakai
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A E101 L103 E99 L101
BS02 CA A N127 E129 N125 E127
BS03 CA A E129 E150 E127 E148
Gene Ontology
Molecular Function
GO:0004842 ubiquitin-protein transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0044403 biological process involved in symbiotic interaction

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Molecular Function
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Biological Process
External links
PDB RCSB:5vgc, PDBe:5vgc, PDBj:5vgc
PDBsum5vgc
PubMed
UniProtB6DZC0

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