Structure of PDB 5vcj Chain A

Receptor sequence
>5vcjA (length=267) Species: 10090 (Mus musculus) [Search protein sequence]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMSPKEDYPIEIQLSAGCEM
YPGNASESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGT
SATVQMLLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVHRQLVCHVSG
FYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLA
CRVKHSSLGGQDIILYW
3D structure
PDB5vcj Enhancing T cell responses and tumour immunity by vaccination with peptides conjugated to a weak NKT cell agonist.
ChainA
Resolution3.16 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A S114 W129 G130 S108 W123 G124
BS02 N57 A Y73 S76 D80 L150 D153 T156 Y67 S70 D74 L144 D147 T150
External links
PDB RCSB:5vcj, PDBe:5vcj, PDBj:5vcj
PDBsum5vcj
PubMed30656346
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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