Structure of PDB 5va8 Chain A

Receptor sequence
>5va8A (length=261) Species: 391038 (Paraburkholderia phymatum STM815) [Search protein sequence]
HHMDLGIAGKSALVCAASKGLGRGCAEALAAEGVNVTIVARTPETLDATA
AAIRANAGVDVQAVACDITTPEGRAAALAACPQPDILVNNAGGPPPGDFR
NFTHDDWIRALEANMLTPIELIRATIDGMISRGFGRVVNITSSSVKAPID
VLGLSNGARSGLTGFIAGVARKVAPNGVTINNLLPGIFDTDRIAVTFDAA
AKAQNISVDEARKQRMATIPARRFGTPDEFGRACAFLCSVHAGYITGQNW
LIDGGAYPGTY
3D structure
PDB5va8 Crystal Structure of Short-chain dehydrogenase/reductase SDR from Burkholderia phymatum in complex with NADP
ChainA
Resolution1.6 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) S140 R157
Catalytic site (residue number reindexed from 1) S142 R159
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAP A A14 S16 K17 G18 L19 A38 R39 T40 D65 I66 N88 A89 G90 G91 R157 P183 G184 I185 F186 T188 A16 S18 K19 G20 L21 A40 R41 T42 D67 I68 N90 A91 G92 G93 R159 P185 G186 I187 F188 T190
BS02 TCE A S140 S141 I147 L150 S153 R157 G184 T194 S142 S143 I149 L152 S155 R159 G186 T196
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:5va8, PDBe:5va8, PDBj:5va8
PDBsum5va8
PubMed
UniProtB2JE32

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