Structure of PDB 5udy Chain A

Receptor sequence
>5udyA (length=388) Species: 9606 (Homo sapiens) [Search protein sequence]
QNKLLLVSFDGFRWNYDQDVDTPNLDAMARDGVKARYMTPAFVTMTSPCH
FTLVTGKYIENHGVVHNMYYNTTSKVKLPYHATLGIQRWWDNGSVPIWIT
AQRQGLRAGSFFYPGGNVTYQGVAVTRSRKEGIAHNYKNETEWRANIDTV
MAWFTEEDLDLVTLYFGEPDSTGHRYGPESPERREMVRQVDRTVGYLRES
IARNHLTDRLNLIITSDHGMTTVDKRAGDLVEFHKFPNFTFRDIEFELLD
YGPNGMLLPKEGRLEKVYDALKDAHPKLHVYKKEAFPEAFHYANNPRVTP
LLMYSDLGYVIHGRINVQFNNGEHGFDNKDMDMKTIFRAVGPSFRAGLEV
EPFESVHVYELMCRLLGIVPEANDGHLATLLPMLHTES
3D structure
PDB5udy Crystal structure of the human alkaline sphingomyelinase provides insights into substrate recognition.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.4.12: sphingomyelin phosphodiesterase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ZN A D39 T75 D246 H247 D10 T46 D217 H218
BS02 ZN A D199 H203 H353 D170 H174 H324
External links
PDB RCSB:5udy, PDBe:5udy, PDBj:5udy
PDBsum5udy
PubMed28292932
UniProtQ6UWV6|ENPP7_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 (Gene Name=ENPP7)

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