Structure of PDB 5u98 Chain A

Receptor sequence

>5u98A (length=273) Species: 9606 (Homo sapiens) [Search protein sequence]

SHSMRYFYTAMSRPGRGEPRFIAVGYVDDTQFVRFDSDAASPRMAPRAPW
IEQEGPEYWDGETRNMKASAQTYRENLRIALRYYNQSEAGSHIIQVMYGC
DVGPDGRLLRGHDQSAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAR
VAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEATL
RCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPS
GEEQRYTCHVQHEGLPKPLTLRW

3D structure

PDB

5u98 Structural Elements Recognized by Abacavir-Induced T Cells.

Chain

Resolution

2.0 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	Y7 Y9 E63 N66 M67 A69 S70 T73 N77 I80 Y84 Y99 T143 W147 Q155 Y159 W167 Y171	Y6 Y8 E62 N65 M66 A68 S69 T72 N76 I79 Y83 Y98 T142 W146 Q154 Y158 W166 Y170
BS02	1KX	A	Y9 Y74 I95 V97 Y99 D114 Q115 S116 Y123 I124 W147	Y8 Y73 I94 V96 Y98 D113 Q114 S115 Y122 I123 W146

External links

PDB	RCSB:5u98, PDBe:5u98, PDBj:5u98
PDBsum	5u98
PubMed	28686208
UniProt	P01889\|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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