Structure of PDB 5u5n Chain A

Receptor sequence
>5u5nA (length=279) Species: 88036 (Selaginella moellendorffii) [Search protein sequence]
VLAAAPVMVNDCTGKVGQAVAEAAVAAGLRLVPLSLTGPGRGGKRVVIGN
VEVDVREVSEREDVVKEVITEYPNVIVVDYTLPAAVNDNAEFYCKQGLPF
VMGTTGGDREKLLDVARKSGTYSIIAPQMGKQVVAFVAAMEIMAKQFPGA
FSGYTLQVTESHQSTKADVSGTALAVISSLRKLGLDFKDEQVELVRDPKE
QMTRMGVPEQHLNGHAFHTYKIISPDGTVFFEFKHNVCGRSIYAQGTVDA
VLFLSKKIQEKSEKRLYNMIDVLEGGSMR
3D structure
PDB5u5n Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
ChainA
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.17.1.8: 4-hydroxy-tetrahydrodipicolinate reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD A D20 G23 K24 V25 L45 T46 G47 Y89 T90 L91 A94 N98 G112 T114 P136 M138 Y252 D11 G14 K15 V16 L36 T37 G38 Y80 T81 L82 A85 N89 G103 T105 P127 M129 Y243
BS02 CA A T22 R50 K53 T13 R41 K44
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase
GO:0016491 oxidoreductase activity
GO:0070402 NADPH binding
Biological Process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process
Cellular Component
GO:0009570 chloroplast stroma

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5u5n, PDBe:5u5n, PDBj:5u5n
PDBsum5u5n
PubMed29187521
UniProtD8R6G2

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