Structure of PDB 5u5i Chain A

Receptor sequence
>5u5iA (length=272) Species: 88036 (Selaginella moellendorffii) [Search protein sequence]
AAPVMVNDCTGKVGQAVAEAAVAAGLRLVPLSLTGPGRGGKRVVIGNVEV
DVREVSEREDVVKEVITEYPNVIVVDYTLPAAVNDNAEFYCKQGLPFVMG
TTGGDREKLLDVARKSGTYSIIAPQMGKQVVAFVAAMEIMAKQFPGAFSG
YTLQVTESHQDVSGTALAVISSLRKLGLDFKDEQVELVRDPKEQMTRMGV
PEQHLNGHAFHTYKIISPDGTVFFEFKHNVCGRSIYAQGTVDAVLFLSKK
IQEKSEKRLYNMIDVLEGGSMR
3D structure
PDB5u5i Plant DHDPR forms a dimer with unique secondary structure features that preclude higher-order assembly.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.17.1.8: 4-hydroxy-tetrahydrodipicolinate reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD A D20 G23 K24 V25 L45 T46 G47 Y89 T90 L91 G112 T114 P136 M138 Y252 D8 G11 K12 V13 L33 T34 G35 Y77 T78 L79 G100 T102 P124 M126 Y236
BS02 CA A T22 K53 T10 K41
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase
GO:0016491 oxidoreductase activity
GO:0070402 NADPH binding
Biological Process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process
Cellular Component
GO:0009570 chloroplast stroma

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Cellular Component
External links
PDB RCSB:5u5i, PDBe:5u5i, PDBj:5u5i
PDBsum5u5i
PubMed29187521
UniProtD8R6G2

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