Structure of PDB 5u38 Chain A

Receptor sequence
>5u38A (length=239) Species: 115002 (Platypodium elegans) [Search protein sequence]
TDSLSFSFINFDRDERNLIFQGDAHTSRNNILQLTRTDSNGAPVRSTVGR
ILHSAQVRLWEKSTNRVANFQTQFSFFLSSPLSNPADGIAFFIAPPDTTI
PSGSAGGLLGLFNPRTALNESANQVLAVEFDTFFAQNSNTWDPNYQHIGI
DVNSIRSSKVVRWERREGKTLNVLVTYNPSTRTIDVVATYPDGQRYQLSH
VVDLTTILPEWVRVGFSAASGEQFQTHNLESWSFTSTLL
3D structure
PDB5u38 Structural studies and nociceptive activity of a native lectin from Platypodium elegans seeds (nPELa).
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MMA A F133 S138 E222 F133 S138 E222
BS02 MAN A A86 D87 G107 F133 G221 E222 Q223 A86 D87 G107 F133 G221 E222 Q223
BS03 MN A E129 D131 D142 H147 E129 D131 D142 H147
BS04 CA A D131 F133 N139 D142 D131 F133 N139 D142
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5u38, PDBe:5u38, PDBj:5u38
PDBsum5u38
PubMed28867234
UniProtG1EUI6

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