Structure of PDB 5u0t Chain A

Receptor sequence
>5u0tA (length=311) Species: 1877 (Micromonospora echinospora) [Search protein sequence]
IVGGSTIQPERVDAAALRQLGDAMRKVVGSADPTPLADLLSGTPVDPDEL
TREVGADGRQALLDSGMAVDDGTTFSSPLRGHQLHGVVVLSDPDVEEEVQ
HRWYVDPLWEADLLIRLMLRRGGARALDMGCGSGVLSLVLADRYESVLGV
DVNPRAVALSRLNAALNGLTNVTFREGDMFEPAEGRFSRIVFNSPTNEEG
NEFVDLLEAGEPILETFFRNVPRKLESGGIVEVNLAMNDYPGDPFRERLA
DWLGLTENGLRVQIFTSQRRATESGGEWKRGWLVVAPGPVGLTEVEWPYH
DRYEEDPDALL
3D structure
PDB5u0t Structural Basis of the Selectivity of GenN, an Aminoglycoside N-Methyltransferase Involved in Gentamicin Biosynthesis.
ChainA
Resolution2.109 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 SAH A D107 G131 C132 G133 V136 D152 V153 M180 N194 L207 L208 I214 D106 G130 C131 G132 V135 D151 V152 M179 N193 L206 L207 I213
BS02 7QM A D95 V96 E98 W110 E111 N194 S195 N198 L208 E209 D94 V95 E97 W109 E110 N193 S194 N197 L207 E208
BS03 MG A E98 D206 E97 D205
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008168 methyltransferase activity
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0032259 methylation

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Molecular Function

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Biological Process
External links
PDB RCSB:5u0t, PDBe:5u0t, PDBj:5u0t
PDBsum5u0t
PubMed28876898
UniProtQ2MG72

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