Structure of PDB 5trz Chain A

Receptor sequence
>5trzA (length=275) Species: 10090 (Mus musculus) [Search protein sequence]
PHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAPW
MEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFGC
DVGSDWRLLRGYHQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQAG
DAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDVTL
RCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVVPL
GKEQNYTCHVHHKGLPEPLTLRWKP
3D structure
PDB5trz MHC-restricted Ag85B-specific CD8+T cells are enhanced by recombinant BCG prime and DNA boost immunization in mice.
ChainA
Resolution2.247 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 V9 F45 Q63 R66 S69 D70 W73 S77 T80 Y84 R97 I142 T143 K146 W147 D152 Y155 Y156 Y159 Y6 V8 F44 Q62 R65 S68 D69 W72 S76 T79 Y83 R96 I141 T142 K145 W146 D151 Y154 Y155 Y158
External links
PDB RCSB:5trz, PDBe:5trz, PDBj:5trz
PDBsum5trz
PubMed31135967
UniProtP01902|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)

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