Structure of PDB 5tkr Chain A

Receptor sequence
>5tkrA (length=432) Species: 29829 (Lipomyces starkeyi) [Search protein sequence]
NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQP
IKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDA
IASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAA
GRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYY
DFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPY
FQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVD
HYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAR
AKEAITFAWQGMEALVGRSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKG
MAFGGDAQQLPWVSEMIVKKKGKVITNNWALE
3D structure
PDB5tkr Trade-offs between enzyme fitness and solubility illuminated by deep mutational scanning.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.232: levoglucosan kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A G22 S24 D26 G188 N217 D221 Y234 D237 G327 G328 Y331 G13 S15 D17 G179 N208 D212 Y225 D228 G318 G319 Y322
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016773 phosphotransferase activity, alcohol group as acceptor
GO:0046872 metal ion binding
Biological Process
GO:0006040 amino sugar metabolic process
GO:0009254 peptidoglycan turnover
GO:0016310 phosphorylation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5tkr, PDBe:5tkr, PDBj:5tkr
PDBsum5tkr
PubMed28196882
UniProtB3VI55|LGK_LIPST Levoglucosan kinase

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