Structure of PDB 5tf0 Chain A

Receptor sequence
>5tf0A (length=733) Species: 471870 (Bacteroides intestinalis DSM 17393) [Search protein sequence]
QDMDRFIDALMKKMTVEEKIGQLNLPVSGSDVAKKIEQGLVGGLLNLKGV
EKIRDVQKLAIEKSRLGIPLIFGMDVVHGYETIFPIPLGLSCSWDMEAIR
KSARVAAIEASADGISWTFSPMVDISRDPRWGRVSEGNGEDPFLGGAIAK
AMVSGYQGIDLNNQLKRNDEIMACVKHFALYGAGEAGRDYNTVDMSRNRM
FNEYMYPYQAAVDAGVGSVMASFNEIDGIPATANKWLMTDVLRKQWGFDG
FVVTDFTGISEMIAHGIGDLQTVSARALNAGVDMDMVSEGFTGTIKKSID
EGKISMETLDKACRRILEAKYKLGLFDNPYKYCDLKRPKRDIFTKEHRDA
ARKIAGESFVLLKNDKSSANPTLPLKKEGTVAVIGPLANTRSNMPGTWSV
AARLNDYPSVYEGLKEMMKGKVNITYAKGSNLISDAAYEERATMFGRSLN
RDNRTDKEMLDEALKVAANADVIIAALGESSEMSGESSSRTNLALPDVQR
TLLEALLKTGKPVVLTLFTGRPLTLTWEQEHVPAILNVWFGGSEAAYAIG
DVLFGDVNPSGKLTMTFPKNVGQIPLFYNHKNTGRPLLEGKWFEKFRSNY
LDVDNDPLYPFGYGLSYTNFQYSDITLSAPTMGQDGSVTAMVTVTNTGKY
DGAEVVQLYIRDLVGSITRPVKELKGFDKIFLKAGESKTVSFKITPELLR
FYDYELNYVAEPGDFDIMIGGNSQSVKTTHLSL
3D structure
PDB5tf0 Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis
ChainA
Resolution2.2021 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D292 S523
Catalytic site (residue number reindexed from 1) D255 S484
Enzyme Commision number 3.2.1.21: beta-glucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D701 V703 D662 V664
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422 beta-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009251 glucan catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5tf0, PDBe:5tf0, PDBj:5tf0
PDBsum5tf0
PubMed
UniProtB3C777

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