Structure of PDB 5szb Chain A

Receptor sequence

>5szbA (length=115) Species: 9606 (Homo sapiens) [Search protein sequence]

GTVIPNNYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMT
EAVKTYKWQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEP
PEGSWSCHLCWELLK

3D structure

PDB

5szb Identification of H3K4me1-associated proteins at mammalian enhancers.

Chain

Resolution

1.2 Å

3D
structure

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	A	D263 F264 R289 S290 I314 E315 K317 D328 D329 L331 L332 F333 C334 D335 D338 P354 G356	D10 F11 R36 S37 I61 E62 K64 D75 D76 L78 L79 F80 C81 D82 D85 P101 G103
BS02	ZN	A	C262 C265 H292 C295	C9 C12 H39 C42
BS03	ZN	A	C284 C287 C313 C316	C31 C34 C60 C63
BS04	ZN	A	C319 C322 H342 C345	C66 C69 H89 C92
BS05	ZN	A	C334 C337 C360 C363	C81 C84 C107 C110

External links

PDB	RCSB:5szb, PDBe:5szb, PDBj:5szb
PDBsum	5szb
PubMed	29255264
UniProt	Q92784\|DPF3_HUMAN Zinc finger protein DPF3 (Gene Name=DPF3)