Structure of PDB 5org Chain A

Receptor sequence
>5orgA (length=257) Species: 1183423 (Agrobacterium tumefaciens str. B6) [Search protein sequence]
MQEKSITIATEGGYAPWNFSGPGGKLDGFEIDLANALCEKMKAKCQIVAQ
NWDGIMPSLTGKKYDAIMAAMSVTPKRQEVIGFSIPYAAGINGFAVMGDS
KLAEMPGLGETYSLDSQADAAKKAIADISSFLNGTTVGVQGSTTASTFLD
KYFKGSVDIKEYKSVEEHNLDLTSGRLDAVLANATVLAAAIEKPEMKGAK
LVGPLFSGGEFGVVAVGLRKEDTALKADFDAAIKAASEDGTIKTLSLKWF
KVDVTPQ
3D structure
PDB5org Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens.
ChainA
Resolution1.99 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 6DB A E30 Y33 W71 A88 A89 M90 S91 R96 N111 Q159 T162 T163 N202 E11 Y14 W52 A69 A70 M71 S72 R77 N92 Q140 T143 T144 N183 MOAD: Kd=0.009uM
PDBbind-CN: -logKd/Ki=8.40,Kd=0.004uM
Gene Ontology
Molecular Function
GO:0015276 ligand-gated monoatomic ion channel activity
Biological Process
GO:0034220 monoatomic ion transmembrane transport
GO:0071705 nitrogen compound transport
Cellular Component
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space

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Biological Process
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Cellular Component
External links
PDB RCSB:5org, PDBe:5org, PDBj:5org
PDBsum5org
PubMed29269740
UniProtP0A4F8|OCCT_RHIRD Octopine-binding periplasmic protein (Gene Name=occT)

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