Structure of PDB 5oqd Chain A

Receptor sequence
>5oqdA (length=184) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
RVNEEQIYCYCGKPGKFDHNMLQCCKCRNWFHTQCMQNFKKKLLRGDMFF
VFCCTVCNNGIEFVRRMQIEWVDVLHIALYNLRKQHKYHHLLNDIWPFIL
EQRHQLPICEKWRTLPETALMERLKQTLKDYSDRFVCGREFKRAPAFYAL
RHSGPPHIPKVFLEPHEELSDELLEKRFKLMLMP
3D structure
PDB5oqd DNA binding by PHF1 prolongs PRC2 residence time on chromatin and thereby promotes H3K27 methylation.
ChainA
Resolution2.447 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C515 C517 H538 C541 C9 C11 H32 C35
BS02 ZN A C530 C533 C560 C563 C24 C27 C54 C57
External links
PDB RCSB:5oqd, PDBe:5oqd, PDBj:5oqd
PDBsum5oqd
PubMed29058710
UniProtQ24459|PCL_DROME Polycomb protein Pcl (Gene Name=Pcl)

[Back to BioLiP]