Structure of PDB 5opj Chain A

Receptor sequence
>5opjA (length=772) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence]
HQVSYFSLQDVKLLSSPFLQAQQTDLHYILALDPDRLSAPFLREAGLTPK
APSYTNWENTGLDGHIGGHYLSALSMMYAATGDTAIYHRLNYMLNELHRA
QQAVGTGFIGGTPGSLQLWKEIKAGDIRAGGFSLNGKWVPLYNIHKTYAG
LRDAYLYAHSDLARQMLIDLTDWMIDITSGLSDNQMQDMLRSEHGGLNET
FADVAEITGDKKYLKLARRFSHKVILDPLIKNEDRLNGMHANTQIPKVIG
YKRVAEVSKNDKDWNHAAEWDHAARFFWNTVVNHRSVCIGGNSVREHFHP
SDNFTSMLNDVQGPETCNTYNMLRLTKMLYQNSGDVDNSNKPDPRYVDYY
ERALYNHILSSQEPDKGGFVYFTPMRPGHYRVYSQPETSMWCCVGSGLEN
HTKYGEFIYAHQQDTLYVNLFIPSQLNWKEQGVTLTQETLFPDDEKVTLR
IDKAAKKNLTLMIRIPEWAYEITINGKKHLSDIQTGASTYLPIRRKWKKG
DMITFHLPMKVSLEQIPDKKDYYAFLYGPIVLATSTGTENLDGIYADDSR
GGHIAHGRQTPLQEIPMLIGNPDSIRHSLHKLSGSKLAFSYDGNVYPTQS
LELIPFFRLHNSRYAVYFRQASEEQFKTIQEEMATAERKATELANRTVDL
IFPGEQQPESDHSIQYEASETGTHKDRHFRRAKGWFSYNLKIKEEASQLM
ITVRQEDRNKAVILLNNEKLTVHPTVSKADKDGFIRLCYLLPRKLKVGSC
EILFKPDGTEWTSAVYEVRLLK
3D structure
PDB5opj Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides.
ChainA
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AHR A W81 Y166 E217 H264 N266 E320 E339 C416 Q689 W57 Y142 E193 H240 N242 E296 E315 C392 Q657
BS02 ZN A E339 C341 C416 C417 E315 C317 C392 C393
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5opj, PDBe:5opj, PDBj:5opj
PDBsum5opj
PubMed29255254
UniProtQ8AAW3

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