Structure of PDB 5opd Chain A

Receptor sequence
>5opdA (length=377) Species: 331112 (Escherichia coli HS) [Search protein sequence]
PHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGARAFDQIDNAPEITINTS
HVEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQT
REHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGD
DTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIE
DVFSISGRGTVVTGRVERGIIKVGEEVEIVGIKETQKSTCTGVEMFRKLL
DEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDE
GGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHP
IAMDDGLRFAIREGGRTVGAGVVAKVL
3D structure
PDB5opd Structure of phosphorylated EF-Tu in complex with GTP
ChainA
Resolution2.75 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GTP A D22 G24 K25 T26 T27 F47 N136 K137 D139 S174 L176 D12 G14 K15 T16 T17 F36 N120 K121 D123 S158 L160
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003746 translation elongation factor activity
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
GO:0097216 guanosine tetraphosphate binding
Biological Process
GO:0006412 translation
GO:0006414 translational elongation
GO:0046677 response to antibiotic
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0032045 guanyl-nucleotide exchange factor complex

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Biological Process
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Cellular Component
External links
PDB RCSB:5opd, PDBe:5opd, PDBj:5opd
PDBsum5opd
PubMed
UniProtP0CE47|EFTU1_ECOLI Elongation factor Tu 1 (Gene Name=tufA)

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