Structure of PDB 5ong Chain A

Receptor sequence
>5ongA (length=96) Species: 8355 (Xenopus laevis) [Search protein sequence]
HCYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSA
VMALQEASEAYLVALFEDTNLAAIHAKRVTIMPKDIQLARRIRGER
3D structure
PDB5ong Site-Specific Disulfide Crosslinked Nucleosomes with Enhanced Stability.
ChainA
Resolution2.797 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A C40 Y41 R42 R63 R72 R83 F84 Q85 S86 R116 V117 T118 M120 C2 Y3 R4 R25 R34 R45 F46 Q47 S48 R78 V79 T80 M82
BS02 dna A H39 Y41 G44 V46 A47 R49 R63 K64 L65 P66 R69 R83 H1 Y3 G6 V8 A9 R11 R25 K26 L27 P28 R31 R45
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5ong, PDBe:5ong, PDBj:5ong
PDBsum5ong
PubMed29113904
UniProtP84233|H32_XENLA Histone H3.2

[Back to BioLiP]