Structure of PDB 5oea Chain A

Receptor sequence
>5oeaA (length=404) Species: 749413 (Deep-sea thermophilic phage D6E) [Search protein sequence]
FSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMWAMDTF
NEQNFGMAGKTIGALRRNVITPLKRMLKSRGYRVKDHRADNYLTITFKGK
TNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFVNQATARCSVDG
AKLWFNCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQVKERY
QRMYKGVFYQRYILGLWVLAEGIIYDMFDQDEHVVPTVPRPYEKYYVSCD
YGTQNPTTFGLWGLYNGVWYKVKEYHYDGRKENKQKTDQEYYEDLMKFIE
DIEKHKFKGVIVDPSAASFIALLRQKGIKVIKAKNDVLDGIRNVATALNK
KMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADRYFVNT
ILFG
3D structure
PDB5oea Structure of the large terminase from a hyperthermophilic virus reveals a unique mechanism for oligomerization and ATP hydrolysis.
ChainA
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AGS A F14 I43 R44 G46 K47 T48 I49 N171 N202 S204 F1 I30 R31 G33 K34 T35 I36 N158 N189 S191
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5oea, PDBe:5oea, PDBj:5oea
PDBsum5oea
PubMed29069443
UniProtE5DV50

[Back to BioLiP]