Structure of PDB 5odp Chain A

Receptor sequence
>5odpA (length=99) Species: 309807 (Salinibacter ruber DSM 13855) [Search protein sequence]
RGVNKVILIGNLGDKPELRYTGSGTAVCNMSLATNETYTDSDGNEVQNTE
WHDVVAWGRLGEICNEYLKKGSQVYFEGKLQTRSSTEVKAQEMMFLDSN
3D structure
PDB5odp Single-strand binding protein
ChainA
Resolution2.535 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A G15 A35 N37 T51 W53 K72 G13 A33 N35 T49 W51 K70
BS02 dna A T23 G24 V29 N31 W59 K81 E99 K101 T21 G22 V27 N29 W57 K79 E87 K89
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003697 single-stranded DNA binding
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0051096 positive regulation of helicase activity
Cellular Component
GO:0009295 nucleoid

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5odp, PDBe:5odp, PDBj:5odp
PDBsum5odp
PubMed
UniProtQ2S565

[Back to BioLiP]