Structure of PDB 5od5 Chain A

Receptor sequence
>5od5A (length=288) Species: 197 (Campylobacter jejuni) [Search protein sequence]
MLPISMSDEGDSFLVKDSLGENKIPKNPSKVVILDLGILDTFDALKLNDK
VVGVPAKNLPKYLQQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQSKF
YDKLKEIAPTLFVGLDNANFLSSFENNVLSVAKLYGLEKEALEKISDIKN
EIEKAKSIVDEDKKALIILTNSNKISAFGPQSRFGIIHDVLGINAVDENI
KVGTHGKSINSEFILEKNPDYIFVVDRNVILGNKERAQGILDNALVAKTK
AAQNKKIIYLDPEYWYLASGNGLESLKTMILEIKNAVK
3D structure
PDB5od5 Redox-switchable siderophore anchor enables reversible artificial metalloenzyme assembly
ChainA
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE A R249 Y288 R227 Y266
BS02 95B A Q98 R118 K121 R205 R249 Y288 Q76 R96 K99 R183 R227 Y266 PDBbind-CN: -logKd/Ki=7.74,Kd=18.3nM
BS03 9RT A T226 H227 T204 H205 PDBbind-CN: -logKd/Ki=7.74,Kd=18.3nM
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0006826 iron ion transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:5od5, PDBe:5od5, PDBj:5od5
PDBsum5od5
PubMed
UniProtQ0P8Q4

[Back to BioLiP]