Structure of PDB 5o20 Chain A

Receptor sequence
>5o20A (length=162) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
NHHLYPDELNVSNNPHYRPKPVSYDSTLPPDHIKVYSRTLFIGGVPLNMK
EWDLANVLKPFAEVQSVILNNSRKHAFVKVYSRHEAENVLQNFNKDGALP
LRTRWGVGFGPRDCCDYQHGYSIIPMHRLTDADKKWSVSAQWGGTSGQPL
VTGIVFEEPDII
3D structure
PDB5o20 The structure of transcription termination factor Nrd1 reveals an original mode for GUAA recognition.
ChainA
Resolution3.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A F342 G344 G345 I369 K375 H376 F378 R403 R405 W406 R413 Y418 F41 G43 G44 I68 K74 H75 F77 R102 R104 W105 R112 Y117
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:5o20, PDBe:5o20, PDBj:5o20
PDBsum5o20
PubMed28973465
UniProtP53617|NRD1_YEAST Protein NRD1 (Gene Name=NRD1)

[Back to BioLiP]