Structure of PDB 5nja Chain A

Receptor sequence
>5njaA (length=480) Species: 511145 (Escherichia coli str. K-12 substr. MG1655) [Search protein sequence]
SLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLE
DRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVR
DSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKR
VQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGA
SGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVV
LGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGT
MVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGR
RESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSD
KFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGV
GVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
3D structure
PDB5nja The Origins of Specificity in the Microcin-Processing Protease TldD/E.
ChainA
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A H262 E263 H267 G394 Q395 V396 D397 C454 G455 H261 E262 H266 G393 Q394 V395 D396 C453 G454
BS02 ZN A H262 H267 C454 H261 H266 C453
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005515 protein binding
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
GO:0016485 protein processing
Cellular Component
GO:0005829 cytosol
GO:1905368 peptidase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5nja, PDBe:5nja, PDBj:5nja
PDBsum5nja
PubMed28943336
UniProtP0AGG8|TLDD_ECOLI Metalloprotease TldD (Gene Name=tldD)

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