Structure of PDB 5nit Chain A

Receptor sequence
>5nitA (length=581) Species: 5061 (Aspergillus niger) [Search protein sequence]
GIEASLLTDPKDVSGRTVDYIIAGGGLVGLTTAARLTENPNISVLVIESG
SYESDRGPIIEDLNAYGDIFGSSVDHAYETVELATNNQTALVRSGNGLGG
STLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAK
QIAAGHYFNTSCHGVNGTVHAGPRDTGDDYSPIVKALMSAVEDRGVPTKK
DFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGK
VLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSG
IGMKSILEPLGIDTVVDLPVGLNLQDQTTATVRSRITSAGAGQGQAAWFA
TFNETFGDYSEKAHELLNTKLEQWAEEAVARGGFHNTTALLIQYENYRDW
IVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDP
QYFLNELDLLGQAAATQLARNISNSGAMQTYFAGETIPGDNLAYDADLSA
WTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAAKVYGVQGLRVIDGSIP
PTQVSSHVMTVFYAMALKISDAILEDYASMQ
3D structure
PDB5nit Shuffling Active Site Substate Populations Affects Catalytic Activity: The Case of Glucose Oxidase.
ChainA
Resolution1.87 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) T357 W426 N514 H516 S558 H559
Catalytic site (residue number reindexed from 1) T355 W424 N512 H514 S556 H557
Enzyme Commision number 1.1.3.4: glucose oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A G26 L29 V30 E50 S51 H78 R95 G97 N98 G102 S103 N107 G108 T110 Y249 V250 A289 Y515 G549 H559 V560 M561 F564 G24 L27 V28 E48 S49 H76 R93 G95 N96 G100 S101 N105 G106 T108 Y247 V248 A287 Y513 G547 H557 V558 M559 F562
BS02 OXY A H516 H559 V560 H514 H557 V558
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046562 glucose oxidase activity
GO:0050660 flavin adenine dinucleotide binding
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5nit, PDBe:5nit, PDBj:5nit
PDBsum5nit
PubMed29291138
UniProtP13006|GOX_ASPNG Glucose oxidase (Gene Name=gox)

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