Structure of PDB 5nfg Chain A

Receptor sequence
>5nfgA (length=333) Species: 4265 (Cynara cardunculus) [Search protein sequence]
RDSGSGIVALTNDRDTAYYGEIGIGTPPQNFAVIFDTGSSDLWVPSTKCD
TSLACVIHPRYDSGDSSTYKGNGTTASIQYGTGAIVGFYSQDSVEVGDLV
VEHQDFIETTEEDDTVFLKSEFDGILGLGFQEISAGKAVPVWYNMVNQGL
VEEAVFSFWLNRNVDEEEGGELVFGGVDPNHFRGNHTYVPVTRKGYWQFE
MGDVLIGDKSSGFCAGGCAAIADSGTSFFAGPTAIITQINQAIGAKESIV
DCNGISSMPNIAFTIGSKLFEVTPEQYIYKVGEGEAATCISGFTALDIMS
PQGPIWILGDMFMGPYHTVFDYGKLRVGFAEAV
3D structure
PDB5nfg Functional and structural characterization of synthetic cardosin B-derived rennet.
ChainA
Resolution2.375 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D80 S83 D85 W87 Y124 D267 T270
Catalytic site (residue number reindexed from 1) D36 S39 D41 W43 Y80 D223 T226
Enzyme Commision number 3.4.23.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN A H147 N188 H103 N144
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5nfg, PDBe:5nfg, PDBj:5nfg
PDBsum5nfg
PubMed28770303
UniProtQ9XFX4|CARDB_CYNCA Procardosin-B (Gene Name=cardB)

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