Structure of PDB 5nes Chain A

Receptor sequence
>5nesA (length=114) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVI
GTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDN
DYNDAVVVINWPLG
3D structure
PDB5nes Design, crystal structure and atomic force microscopy study of thioether ligated d,l-cyclic antimicrobial peptides against multidrug resistant Pseudomonas aeruginosa.
ChainA
Resolution1.606 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A S23 G24 S23 G24
BS02 CA A E95 D99 D101 D104 E95 D99 D101 D104
BS03 CA A N21 D101 N103 D104 N21 D101 N103 D104
BS04 ZDC A S22 S23 D96 D99 D101 D104 S22 S23 D96 D99 D101 D104
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0044010 single-species biofilm formation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5nes, PDBe:5nes, PDBj:5nes
PDBsum5nes
PubMed29163899
UniProtQ9HYN5

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