Structure of PDB 5n5u Chain A

Receptor sequence
>5n5uA (length=309) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
MDEFELIKRNTSEIISEEELREVLKKDEKSASIGFEPSGKIHLGHYLQIK
KMIDLQNAGFDIIIALADLMAYLNQKGELDEIRKIGDYNKKVFEAMGLKA
KYVYGSEFQLDKDYTLNVYRLALKTTLKRARRSMELIAREDENPKVAEVI
YPIMQVNSIHYEGVDVAVGGMEQRKIHMLARELLPKKVVCIHNPVLTGLD
GEGKMSSSKGNFIAVDDSPEEIRAKIKKAYCPAGVVEGNPIMEIAKYFLE
YPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMRLKNAVAEELIKILE
PIRKRLSAH
3D structure
PDB5n5u Structural Basis for the Specific Cotranslational Incorporation of p-Boronophenylalanine into Biosynthetic Proteins.
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.1.1.1: tyrosine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP A F35 H42 G44 H45 Q48 G170 E172 V195 L196 M205 F35 H42 G44 H45 Q48 G170 E172 V195 L196 M205
BS02 7N8 A G34 A65 A67 M70 Y151 Q155 S158 E162 Q173 G34 A65 A67 M70 Y151 Q155 S158 E162 Q173
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004831 tyrosine-tRNA ligase activity
GO:0005524 ATP binding
Biological Process
GO:0006412 translation
GO:0006418 tRNA aminoacylation for protein translation
GO:0006437 tyrosyl-tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:5n5u, PDBe:5n5u, PDBj:5n5u
PDBsum5n5u
PubMed29668275
UniProtQ57834|SYY_METJA Tyrosine--tRNA ligase (Gene Name=tyrS)

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