Structure of PDB 5mun Chain A

Receptor sequence
>5munA (length=182) Species: 837 (Porphyromonas gingivalis) [Search protein sequence]
QSAKIKLDAPTTRTTCTNNSFKQFDASFSFNEVELTKVETKGGTFASVSI
PGAFPTGEVGSPEVPAVRKLIAVPVGATPVVRVKSFTEQVYSLNQYGSEK
LMPHQPSMSKSDDPEKVPFVYNAAAYARKGFVGQELTQVEMLGTMRGVRI
AALTINPVQYDVVANQLKVRNNIEIEVSFQGA
3D structure
PDB5mun Structural insights unravel the zymogenic mechanism of the virulence factor gingipain K from Porphyromonas gingivalis, a causative agent of gum disease from the human oral microbiome.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.22.47: gingipain K.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AZI A T33 C35 T14 C16
Gene Ontology
Molecular Function
GO:0004197 cysteine-type endopeptidase activity

View graph for
Molecular Function
External links
PDB RCSB:5mun, PDBe:5mun, PDBj:5mun
PDBsum5mun
PubMed28196869
UniProtQ51817|KGP83_PORGN Lys-gingipain W83 (Gene Name=kgp)

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