Structure of PDB 5msy Chain A

Receptor sequence
>5msyA (length=457) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence]
QKTYIPWSNGKLVVSEEGRYLKHENGTPFFWLGETGWLLPERLNRDEAEY
YLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYW
DHMDYIIRTAAKKGLYIGMVCIWGSPVSHGEMNVDQAKAYGKFLAERYKD
EPNIIWFIGGDIRGDVKTAEWEALATSIKAIDKNHLMTFHPRGRTTSATW
FNNAPWLDFNMFQSGHRRYGQRFGDGDYPIEENTEEDNWRFVERSMAMKP
MKPVIDGEPIYEEIPHGLHDENELLWKDYDVRRYAYWSVFAGSFGHTYGH
NSIMQFIKPGVGGAYGAKKPWYDALNDPGYNQMKYLKNLMLTFPFFERVP
DQSVIAGQNGERYDRAIATRGNDYLMVYNYTGRPMEVDFSKISGAKKNAW
WYTTKDGKLEYIGEFDNGVHKFQHDSGYSSGNDHVLIVVDSSKDYVKKDC
YQIDTHE
3D structure
PDB5msy Complex pectin metabolism by gut bacteria reveals novel catalytic functions.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NH3 A M108 D110 G111 M82 D84 G85
BS02 NH3 A T61 E284 Y287 T35 E258 Y261
BS03 NH3 A E60 T61 G325 H326 I329 E34 T35 G299 H300 I303
BS04 NH3 A L47 F320 F371 L21 F294 F345
BS05 NH3 A R45 P279 V280 F320 R19 P253 V254 F294
BS06 NH3 A R45 Y46 G318 R19 Y20 G292
BS07 NH3 A P66 E67 L69 I102 P40 E41 L43 I76
BS08 NH3 A N101 Y125 H128 N75 Y99 H102
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