Structure of PDB 5mc8 Chain A

Receptor sequence
>5mc8A (length=348) Species: 657309 (Bacteroides xylanisolvens XB1A) [Search protein sequence]
NNLGTELDYDTFCFYYDWYGSEAIDGQYRHWAHAIAPDPNGSGQNPGTIP
GTQESIASNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDE
TEAKRIGLILDAADKKKIKVCFHLEPYPSRNVQNLRENIVKLITRYGNHP
AFYRKDGKPLFFIYDSYLIEPSEWEKLLSPGGSITIRNTAYDALMIGLWT
SSPTVQRPFILNAHFDGFYTYFAATGFTYGSTPTNWVSMQKWAKENGKIF
IPSVGPGYIDTRIRPWNGSVIRTRTDGQYYDAMYRKAIEAGVSAISITSF
NEWHEGSQIEPAVPYTSSEFTYLDYENREPDYYLTRTAYWVGKFRESK
3D structure
PDB5mc8 Contribution of Shape and Charge to the Inhibition of a Family GH99 endo-alpha-1,2-Mannanase.
ChainA
Resolution1.18 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DGO A Y46 W126 H154 E156 Y195 Y252 E333 E336 Y16 W95 H123 E125 Y164 Y221 E302 E305
BS02 MAN A H63 R295 E333 H335 E336 H33 R264 E302 H304 E305
BS03 MAN A Y195 D196 Y198 F253 F258 Y164 D165 Y167 F222 F227
BS04 MAN A F253 F258 Y289 N298 E336 F222 F227 Y258 N267 E305
Gene Ontology
Molecular Function
GO:0004559 alpha-mannosidase activity
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Cellular Component
GO:0016020 membrane

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Molecular Function
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Cellular Component
External links
PDB RCSB:5mc8, PDBe:5mc8, PDBj:5mc8
PDBsum5mc8
PubMed27992199
UniProtD6D1V7

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