Structure of PDB 5m8y Chain A

Receptor sequence

>5m8yA (length=443) Species: 1150621 (Sulfurospirillum multivorans DSM 12446) [Search protein sequence]

KEKNAAEIRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGE
VKPWFLSAYDEKVRQIENGENGPKMKAKNVGEARAGRALEAAGWTLDINY
GNIYPNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAAR
MAGADLVGVARLNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLP
IETDDELIIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMF
DMWLCQFIRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRMGACITPEFGP
NVRLTKVFTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFE
GRSIHNQSGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKGNIWIHDG
VEWLIDNTRFLNITEVWDGKINTYGLDADHFRDTVSFRKDRVK

3D structure

PDB

5m8y Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.

Chain

Resolution

1.857 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	SF4	A	R291 M292 I296 C329 C332 K333 K334 C335 C390 P391 F392	R289 M290 I294 C327 C330 K331 K332 C333 C388 P389 F390
BS02	SF4	A	C339 P340 I344 C372 C383 G384 C386	C337 P338 I342 C370 C381 G382 C384
BS03	BVQ	A	Y31 T36 A37 F38 Y170 Y246 M249 N272 Q276 S277 V278 A289 M292 G293 A294 C295 V304 R305 L306 H357 N358 Q359 K362 Q364 Y369 C372 W376 Y382	Y29 T34 A35 F36 Y168 Y244 M247 N270 Q274 S275 V276 A287 M290 G291 A292 C293 V302 R303 L304 H355 N356 Q357 K360 Q362 Y367 C370 W374 Y380
BS04	3CH	A	F38 W56 W96 Y102 Y246 W376 Y382	F36 W54 W94 Y100 Y244 W374 Y380

External links

PDB	RCSB:5m8y, PDBe:5m8y, PDBj:5m8y
PDBsum	5m8y
PubMed	28671181

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