Structure of PDB 5m7i Chain A

Receptor sequence
>5m7iA (length=425) Species: 195102 (Clostridium perfringens str. 13) [Search protein sequence]
SLSTNELKEIVRKIGKDLSGKIEDKKLQELFYNCFINTMDTTVEVSEGDA
FVITGDIPAMWLRDSTSQVEHYLPFVKEYPELKAIFTGLINRQVKCIFID
PYANAFNKEPNGQKWDNDITKDSPWVWERKYEIDSLCYPVRLIHKYWKES
GDETFFNDDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEG
LGTPVTYTGMTWSGFRPSNDACEYGYLIPANMFAVVALRYISEIAEKVYK
DEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMGNYNFMDDA
NVPSLLSIPYLEYKGIEDEVYQNTRKFILSKNNRFFFEGKAAKGIGSPHT
PDQYIWHIALSMQGLTTNNQEEIDQLIKLLKETDAGTGYMHEGFHVDDPT
KFTRDWFAWSNSLFSHFIYEKVINK
3D structure
PDB5m7i Computational Design of Experiment Unveils the Conformational Reaction Coordinate of GH125 alpha-Mannosidases.
ChainA
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BMA A E129 K131 D195 N220 H350 E128 K130 D194 N219 H349
BS02 MAN A T55 W62 R64 D65 S219 N220 N302 H350 W357 R405 T54 W61 R63 D64 S218 N219 N301 H349 W356 R404
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5m7i, PDBe:5m7i, PDBj:5m7i
PDBsum5m7i
PubMed28026180
UniProtQ8XNB2

[Back to BioLiP]