Structure of PDB 5m46 Chain A

Receptor sequence
>5m46A (length=429) Species: 363754 (Rhizobium freirei PRF 81) [Search protein sequence]
QGPAMAGNLYGRDGAAIGSLQKLRFFPLAVAGGQGARLVEEDGRELIDLS
GAWGAASLGYGHPAIIEAVSRAAANPAGASILSASNAPAVALAERLTASF
PGRGTHKVWFGHSGSDANEAAYRAITRATGRTGVIAFIGAYHGCTVGSMA
FSGHADGLILLPYPDPYRPYQDDPTGDAVLALLKERLAAVPAGSIAAAFI
EPIQSDGGLIVPPDGFLRKFADICRAHGISVVCDEVKVGLARSGRLHCFE
HEGFVPDILVLGKGLGGGLPLSAVIAPAEILDCASAFAMQTLHGNPVCAA
AGLAVLETIEAENLTTAAERKGKLLREGLARLAERHELIGDIRGRGLACG
VELVRNRQSREPARAETAKLIYRAYELGLVLYYVGMNGNVLEMTPPLTMT
EDEVRHAVNLLDQAFTELSTVSDTLVSQF
3D structure
PDB5m46 Snapshots of the Catalytic Cycle of the Industrial Enzyme alpha-Amino-epsilon-Caprolactam Racemase (ACLR) Observed Using X-ray Crystallography
ChainA
Resolution1.62 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) Q17 Y137 E205 D238 K241 K267 T295 E396
Catalytic site (residue number reindexed from 1) Q21 Y141 E201 D234 K237 K263 T291 E392
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP A S109 G110 S111 Y137 H138 E205 D238 V240 K241 K267 S113 G114 S115 Y141 H142 E201 D234 V236 K237 K263
Gene Ontology
Molecular Function
GO:0008453 alanine-glyoxylate transaminase activity
GO:0008483 transaminase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0009436 glyoxylate catabolic process
GO:0019481 L-alanine catabolic process, by transamination

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Molecular Function
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Biological Process
External links
PDB RCSB:5m46, PDBe:5m46, PDBj:5m46
PDBsum5m46
PubMed
UniProtN6UXY4

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