Structure of PDB 5m1p Chain A

Receptor sequence
>5m1pA (length=187) Species: 1406341 (Thermus phage G20c) [Search protein sequence]
AMNSVFSGLDMLILLPYERRGTRLVVEDYRPDHIYCIGADFGKNQDYSVF
SVLDLDTGAIACLERMNGATWSDQVARLKALSEDYGHAYVVADTWGVGDA
IAEELDAQGINYTPLPVKSSSVKEQLISNLALLMEKGQVAVPNDKTILDE
LRNFRYYRTASGNQVMRAYGRGHDDIVMSLALAYSQY
3D structure
PDB5m1p Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
ChainA
Resolution1.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.21.-
3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D294 F295 D300 Y301 D429 D40 F41 D46 Y47 D175
External links
PDB RCSB:5m1p, PDBe:5m1p, PDBj:5m1p
PDBsum5m1p
PubMed28100693
UniProtA0A1L4BKS3|TERL_BPG20 Terminase, large subunit (Gene Name=G20c_80)

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