Structure of PDB 5lvf Chain A

Receptor sequence
>5lvfA (length=142) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
MAFSSEQFTTKLNTLEDSQESISSASKWLLLQYRDAPKVAEMWKEYMLRP
SVNTRRKLLGLYLMNHVVQQAKGQKIIQFQDSFGKVAAEVLGRINQEFPR
DLKKKLSRVVNILKERNIFSKQVVNDIERSLAAALEHHHHHH
3D structure
PDB5lvf Structural insight into recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by Rtt103p.
ChainA
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A E16 D17 S18 Q19 I22 Y62 N65 H66 Q69 Q70 K72 G73 K75 R108 I112 R116 E16 D17 S18 Q19 I22 Y62 N65 H66 Q69 Q70 K72 G73 K75 R108 I112 R116
Gene Ontology
Molecular Function
GO:0099122 RNA polymerase II C-terminal domain binding
Biological Process
GO:0031124 mRNA 3'-end processing

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Molecular Function
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Biological Process
External links
PDB RCSB:5lvf, PDBe:5lvf, PDBj:5lvf
PDBsum5lvf
PubMed28468956
UniProtQ05543|RT103_YEAST Regulator of Ty1 transposition protein 103 (Gene Name=RTT103)

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