Structure of PDB 5lr8 Chain A

Receptor sequence
>5lr8A (length=844) Species: 112509 (Hordeum vulgare subsp. vulgare) [Search protein sequence]
SIDSSAIASNIQHHADFTPLFSPEHSSPLKAYHATAKSVFDSLIMNWNAT
YDYYNKVNAKQAYYLSMEFLQGRALTNAIGNLELTGQYAEALKQLGHNLE
DVASQEPDPALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQII
TKDGQEEVAENWLEMGNPWEIVRNDVSYPVKFYGKVVEGTDGRKHWIGGE
NIKAVAHDVPIPGYKTKTTNNLRLWSTTVPSQNFDLGAFNAGDHAKANEA
HLNAEKICHVLYPGDESSEGKILRLKQQYTLCSASLQDIISRFESRAGDS
LNWEDFPSKVAVQMNDTHPTLCIPELMRILMDIKGLSWNEAWSITERTVA
YTNHTVLPEALEKWSLDIMQKLLPRHVEIIETIDEELMNNIVSKYGTADI
SLLKQKLKDMRILDNVDLPASVAKLFIKELDPFAKYDPQFPRVVRMANLC
VVGGHSVNGVAEIHSEIVKQDVFNSFYEMWPTKFQNKTNGVTPRRWIRFC
NPELSTIISKWIGSDDWILNTDKLAGLKKFADDEDLQSEWRTAKRNNKMK
VVSLIRDKTGYIVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMS
AKDRRKSFVPRVCIFGGKAFATYVQAKRIVKFITDVAATVNYDPDIGDLL
KVVFVPDYNVSVAETLIPASELSQHISTAGMEASGTSNMKFAMNGCLLIG
TLDGANVEIREEVGEENFFLFGAHAPEIAGLRQERAEGKFVPDLRFEEVK
EYVRSGVFGTSNYDELMGSLEGNEGYGRADYFLVGKDFPSYIECQEKVDE
AYRDQKLWTRMSILNTAGSPKFSSDRTIHEYAKDIWDISPVIMP
3D structure
PDB5lr8 Functional and structural characterization of plastidic starch phosphorylase during barley endosperm development.
ChainA
Resolution2.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H421 K698 R699 K704 T810 K814
Catalytic site (residue number reindexed from 1) H354 K574 R575 K580 T686 K690
Enzyme Commision number 2.4.1.1: glycogen phosphorylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PLP A L137 W620 Y782 N783 V784 G809 T810 S811 K814 L70 W496 Y658 N659 V660 G685 T686 S687 K690
Gene Ontology
Molecular Function
GO:0004645 1,4-alpha-oligoglucan phosphorylase activity
GO:0008184 glycogen phosphorylase activity
GO:0016757 glycosyltransferase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009266 response to temperature stimulus
GO:0009414 response to water deprivation

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Molecular Function
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Biological Process
External links
PDB RCSB:5lr8, PDBe:5lr8, PDBj:5lr8
PDBsum5lr8
PubMed28407006
UniProtF2E0G2

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