Structure of PDB 5kis Chain A

Receptor sequence

>5kisA (length=1446) Species: 935293 (Yersinia entomophaga)

MAITTLSLPKGGAINGMGESVGQAGPDGMVTFSIPLPFSAGRGVAPALSL
SYSSGAGNGPFGMGWQCSAMSISRRTQKGVPQYNEDDEFLSPSGEVMAIA
LNDSGFEDVRTANRLQGIPLPFSYKVTRYQPRLIQDFIKIEYWQPVKQTD
GTPFWIIYSPDGQTHILGKNSHSRVANAENPSQIASWLLEETVTPTGEHI
YYQYSGENQVNCTDAEIALHPQDSAQRYLARIDYGNISPQASLFVLDEEL
PNLTQWLFHLVFDYGERDISINKIPTFEGGTTGWLARPDMFSRYDFGIEI
RNRRLCHQVLGFHRLEALNDRDVTDEIPVLVNRLTLDYDLNNSVSTLVAV
RQVAYETDGSPITQPPLEFDYQRFDTGSIPGWQEMPQLEAFNGYQPYQMI
DLYGEGTPGILYQETPGAWWYKSPQRQIGGDSNAVTYGAMKALPKIPRLQ
ATLMDINGDGRLDWVITSAEWTHFTPLNTLPTEYFHPKAQLADLVGAGLS
DLVLIGPKSVRLYANNVSLPVIGIDSRQLVAFADMLGSGQQHLVEITADS
VKCWPNMGHGRFGQPLTLEGFSQPQTSFNPDRVFLADIDGSGTNDIIYAH
SECLEIYLNESGNRFSKPISLLLPDGVNFDNTCQLQAADIQGLGIASLVM
TVPHMSPTHWRCDLALNKPWLLNVMNNNRGAETCLFYRSSAQFWLDEKQL
VEAAGQQPECHLPFPMHLHWRSEIFDEITGNRLTQEQEYAHGSWDGQERE
FRGFGRLIQRDTDGFAQGTVDIPTHPSRTVSWFATGIPEIDTTLSAEFWR
GDDQAFSPFSPRFTRWENDSGSDVAFIPSEHDAFWLNRAMKGQLLRSELY
GDDGTPEAEIPYSVTEMRHQVRALPTTDATVPSAWCSTIETRSYQYQRVA
ADPQCSQQVVIKADRYGSPLLSVAINYPRRKKPEKSPYPDDLPETLFDSS
YDTQQQQLHLTKQQQNYFHLTNDDNWLLGLPKEQRNDGYQYDQERAPANG
FTLETLIASNSLIGSNQPFTYLGQSRVAYQGGVDEQPSLQALVAYGETAI
LDEKTLQAFVGVLDSKTRDELLFSAGYQLAPRLFRVESEPDVWVARQGYS
EFGDYSQFWRPLSQRSTLLTGKTTLKWDKHYCVVIETQDAAQLVTQARYD
YRFLTPYSLTDANDNQHYVVLNPFGEVIASRFWGTEAGKDAGYSTPQAKP
FVVPATIEAALALSPGIPVAHCAIFEPESWMQKLTQHDVSERMADNGTLW
NALLQARFVTEDGYVCALGRRRWMARHGLSVLMLTLLAEIPRTPPHSLTI
TTDRYDSDDQQQLRQRILFSDGFGRLLQSAQRVEAGESWQRSEDSSLVVN
VSGTPALVVTDNRWAVSGRTEYDGKGQGIRVYQPYFLDDWRYLSDDSART
DLFADTHIYDPLGREYQVITAKGYRRERQYTPWFVVNQDENDTAAN

3D structure

• PDB: 5kis Structure of a new BC complex from Yersinia entomophaga
• Chain: A
• Resolution: 2.4 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	CA	A	D623 D625 S627 T629 D631	D587 D589 S591 T593 D595

Gene Ontology

Molecular Function

• GO:0005515 protein binding

Cellular Component

• GO:0005576 extracellular region
• GO:0005737 cytoplasm

External links

• PDB: RCSB:5kis, PDBe:5kis, PDBj:5kis
• PDBsum: 5kis
• UniProt: B6A880|YENB_YERET Toxin subunit YenB (Gene Name=yenB)