Structure of PDB 5kds Chain A

Receptor sequence
>5kdsA (length=511) Species: 195103 (Clostridium perfringens ATCC 13124) [Search protein sequence]
HMASVLELEMRGDSISEAKKRKVWNFQDWQITGLSARAGDKITVYVDVAE
GDPTPTLLYKQSLTQHGGATSFQLKPGKNEITIPEINYESNGIPKDVIQG
GDLFFTNYKSDSQKRAPKVRIEGASKYPVFILGKSDENEVMKELEAYVEK
IKAEPKTTPNIFAVSSNKSLEFVQATYALDWYKKNNKTPKYTAEQWDQYI
ADAMGFWGFDNSKDVNSDFNFRIMPMVKNLSGGAFMNAGNGVIGIRPGNQ
DAILAANKGWGVAHELGHNFDTGGRTIVEVTNNMMPLFFESKYKTKTRIT
DQNIWENNTYPKVGLDDYSNNELYNKADSTHLAQLAPLWQLYLYDNTFYG
KFERQFRERDFGNKNREDIYKSWVVAASDAMELDLTEFFARHGIRVDDKV
KEDLAKYPKPDKKIYYLNDLAMNYKGDGFTENAKVSVSTSGSNGNIKLSF
SVDDENKDNILGYEIRRDGKYVGFTSNDSFVDTKSNLDEDGVYVVTPYDR
KLNTLNPIEVN
3D structure
PDB5kds Recognition of protein-linked glycans as a determinant of peptidase activity.
ChainA
Resolution1.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A G725 F727 M728 E757 G233 F235 M236 E265
BS02 SIA A F727 N749 G751 G753 V754 F235 N257 G259 G261 V262
BS03 ZN A H756 H760 E771 H264 H268 E279
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