Structure of PDB 5kd8 Chain A

Receptor sequence
>5kd8A (length=537) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence]
SDKWEKEFRIRSYEPYSNIAEWADKLMTKKYSDLDNPTGISVKAGDDIIV
LVGDTYGQNISMQCIWETGTEYKQTASSGDVYMLNPGVNKLTMKGEGQLF
VMYNTELTSNTAKPIKIHIPLGSGTVNGFFDLKEHKTDEKYAELLKKSTH
KYFCIRGEKIMFYFHRNKLLEYVPNNILSAIHLWDNIVGWQQELMGIDDV
RPSQVNNHLFAISPEGSYMWASDYQIGFVYTYLGNILLEDNVMAAEDNAW
GPAHEIGHVHQAAINWASSTESSNNLFSNFIIYKLGKYKSRGNGLGSVAT
ARYANGQAWYNMGDATHQNEDTETHMRMNWQLWIYYHRCEYKTDFWQTLF
KLMREVNMTEGEDPGKKQLEFAKMASKAANQNLTDFFEMWGFFEPVNTTI
EQYGTYKYYVSDAMIREAKEYMAQFPAPKHAFQYIEDRKKSEFPSNDYRY
SAVGDVGYYTQFKENQKITKAITAELAGRKVSIQNGDEAVAFELRENDEN
GKLLYFSTFTTFEIPSSILMVNAKLYAVQADGKRILL
3D structure
PDB5kd8 Recognition of protein-linked glycans as a determinant of peptidase activity.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H574 H578 E591 H254 H258 E271
BS02 SER A H574 E575 H254 E255
External links