Structure of PDB 5k9h Chain A

Receptor sequence
>5k9hA (length=554) Species: 32644 (unidentified) [Search protein sequence]
EPCGPVPTENQLRWQDMEMYAFIHYSLNTYTDEEWGYGNEDPQLFNPSSL
DCRQWARVCKQAGMRGIIFTAKHHCGFCMWPSAYTEYSVKNSPWKNGKGD
VVRELADACREEGLKFAVYLSPWDRNHPAYGQPAYVAYFRNQLRELLTNY
GEIFEVWFDGANGGDGWYGGANETRKIDRTTYYQWPETYKMIRQLQPNCL
IWNDGSDRGDLRWVGTEAGNVGETNWSLLNHDGEVEWHMLHYGLENGDSW
VPGETNTSIRPGWFYHDTENEHVKSLSKLMDTYYKSVGRNSTLLLNFPIA
PNGRIHPNDSLRGIAFKKMIGEVFRKNLAEKARTQTKGDETVIDFGKPTT
FNRFLAEEDIRYGQRVKKFLLEAEINGQWQQLKDALVENGDGLTTIGHRR
IICFPTVNATKLRFTVVNTKCEPFIKKLGVYLAPELTADIPDAGEKKSSN
LHLFFSSPTQMMIDWETEQTITSFRYLPPQESKDGTVTHYTLWASTDWSN
WTKLASGEFSNVVNNPIWQTIKFQPVRAKILKLDADRLATGNRMAYGDVE
VNLK
3D structure
PDB5k9h The structure of a glycoside hydrolase 29 family member from a rumen bacterium reveals unique, dual carbohydrate-binding domains.
ChainA
Resolution2.029 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GOL A H27 H76 D162 W266 H24 H73 D159 W263
BS02 GOL A D162 G163 D207 W216 E220 D159 G160 D204 W213 E217
BS03 GOL A R106 D110 Y153 G154 R103 D107 Y150 G151
BS04 GOL A R336 D347 G349 R333 D344 G346
BS05 GOL A Y286 F327 R402 Y283 F324 R399
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
GO:0016787 hydrolase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006004 fucose metabolic process
GO:0016139 glycoside catabolic process
Cellular Component
GO:0005764 lysosome

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5k9h, PDBe:5k9h, PDBj:5k9h
PDBsum5k9h
PubMed27710940
UniProtA0A1D5B391

[Back to BioLiP]