Structure of PDB 5jsp Chain A

Receptor sequence
>5jspA (length=191) Species: 644107 (Ruegeria lacuscaerulensis ITI-1157) [Search protein sequence]
MMTLENVLEAARHLHQTLPALSEFGNWPTDLTATGLQPRAIPATPLVQAL
DQPGSPRTTGLVQAIRSAAHLAHWKRTYTEAEVGADFRNRYGYFELFGPT
GHFHSTQLRGYVAYWGAGLDYDWHSHQAEELYLTLAGGAVFKVDGERAFV
GAEGTRLHASWQSHAMSTGDQPILTFVLWRGEGLNALPRMD
3D structure
PDB5jsp New Mechanistic Insight from Substrate- and Product-Bound Structures of the Metal-Dependent Dimethylsulfoniopropionate Lyase DddQ.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.4.1.3: dimethylpropiothetin dethiomethylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A H123 H125 E129 Y131 H163 H124 H126 E130 Y132 H164
BS02 DQY A Y92 Y110 Y120 H123 H125 E129 Y131 Y93 Y111 Y121 H124 H126 E130 Y132
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
GO:0047869 dimethylpropiothetin dethiomethylase activity

View graph for
Molecular Function
External links
PDB RCSB:5jsp, PDBe:5jsp, PDBj:5jsp
PDBsum5jsp
PubMed27755868
UniProtD0CY60|DDDQ_RUELI Dimethylsulfonioproprionate lyase DddQ (Gene Name=dddQ)

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