Structure of PDB 5js9 Chain A

Receptor sequence

>5js9A (length=230) Species: 9606 (Homo sapiens) [Search protein sequence]

PQLQESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVG
SLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKLNSVTAADTATY
YCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSG
GTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVT
VPSSSLGTQTYICNVNHKPSNTKVDKRVEP

3D structure

PDB

5js9 Uncleaved prefusion-optimized gp140 trimers derived from analysis of HIV-1 envelope metastability.

Chain

Resolution

6.918 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	MAN	A	W56 T57	W63 T64
BS02	MAN	A	T57 Y58 H59	T64 Y65 H66
BS03	BMA	A	T73 P74	T80 P81

External links

PDB	RCSB:5js9, PDBe:5js9, PDBj:5js9
PDBsum	5js9
PubMed	27349805

[Back to BioLiP]