Structure of PDB 5jrj Chain A

Receptor sequence
>5jrjA (length=306) Species: 964 (Herbaspirillum seropedicae) [Search protein sequence]
AANNSEKSKALAAALAQIEKQFGKGSVMRMEDGVIIQAVSTGSLGLDIAL
GIGGLPRGRVIEIYGPESSGKTTLTLQSIAEMQKLGGTCAFIDAEHALDV
TYAQKLGVNLNDLLISQPDTGEQALEICDALVRSGAVDLIVVDSVAALTP
KAEIERLMSQALRKLTGSINRTNTTVIFINQIGNALKFYASVRLDIRRTG
SIKSGDEVIGSETKVKVVKNKVAPPFREAHFDILYGEGTSREGEILDLGS
EHKVVEKSGAWYSYNGERIGQGKDNARNYLKEHPELAREIENKVRVALGV
PELAGG
3D structure
PDB5jrj Structural and Functional Studies of H. seropedicae RecA Protein - Insights into the Polymerization of RecA Protein as Nucleoprotein Filament.
ChainA
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A E75 S76 S77 G78 K79 T80 T81 D107 Y110 I269 Y271 G272 E67 S68 S69 G70 K71 T72 T73 D99 Y102 I233 Y235 G236
BS02 ATP A E75 S76 G78 K79 T80 T81 D107 Y110 Q201 Y271 G272 E67 S68 G70 K71 T72 T73 D99 Y102 Q181 Y235 G236
BS03 CA A N119 D120 N111 D112
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003684 damaged DNA binding
GO:0003697 single-stranded DNA binding
GO:0005524 ATP binding
GO:0008094 ATP-dependent activity, acting on DNA
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding
GO:0140664 ATP-dependent DNA damage sensor activity
Biological Process
GO:0006259 DNA metabolic process
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0009432 SOS response
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5jrj, PDBe:5jrj, PDBj:5jrj
PDBsum5jrj
PubMed27447485
UniProtD8IYL4

[Back to BioLiP]