Structure of PDB 5jbh Chain A

Receptor sequence
>5jbhA (length=190) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence]
TRDKWKLKQWYIIYAPDFFGGVEVGLTPADDPEKVLNRVVEVTLKDVTGD
FTKSHVKLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFN
ITTKDGYKLRVMAMAIAMRRIQTSQERAIRKIMQEIIYKKAEELNFKDFV
LESVNGKIAAEIAKEAKKIYPLRKAEIRKIKVLEEPQVIA
3D structure
PDB5jbh Cryo-EM study of start codon selection during archaeal translation initiation.
ChainA
Resolution5.34 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A T9 K42 R93 R98 K99 R118 M126 R128 I129 Q130 T131 S132 Q133 R135 R138 K176 I177 Y178 P179 T1 K34 R85 R90 K91 R110 M118 R120 I121 Q122 T123 S124 Q125 R127 R130 K168 I169 Y170 P171
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5jbh, PDBe:5jbh, PDBj:5jbh
PDBsum5jbh
PubMed27819266
UniProtQ8TZE1|RS3A_PYRFU Small ribosomal subunit protein eS1 (Gene Name=rps3ae)

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