Structure of PDB 5j7x Chain A

Receptor sequence

>5j7xA (length=527) Species: 5059 (Aspergillus flavus)

GVLHLDALIIGSGFSGIYLLHKLRDELKLKVKIFEAESDIGGTWNNNRYP
GARVDCPVPFYAYSLPEVWQSWNWTELYPNQKEIKSYFDHVDRVLDVRKD
CLFHSRVNEGTFDEATGRWTVWTTDGKVATAKYLLVAVGFASKSYLPDWK
GLDSFKGTIYHSAHWPEAEEISVKGKKVAVIGTGSTGIQIFQEWAREAEE
AFLFQRTPNLCLPMRQQELHAADYLAECALTFGGLEYQQTPKNTFDASEE
EREAFWEDLYQMGGFRFWQNNYQDLLTSLDANREAYNFWARKTRARIQDP
KKRDLLAPLEPPYPFGTKRPSLEQDFYEQFNKSNVHIVDTKSQPIVGVTP
TGIVTADEKVHEVDIIAVATGFDAVTGGLLRLGLKDVNGVGLDERWKDGM
STYLGMAISGFPNMFLPYSLQAPTAFANGPTLIELQGDWITSLIRKMEME
NVQSVTATPHAESAWNDEVNMIANKTLLPLTDSWYMGSNIPGKPVQSLNY
LGGLPTYRERCAKVLDEDFFGFAKAHH

3D structure

• PDB: 5j7x Structural and Catalytic Characterization of a Fungal Baeyer-Villiger Monooxygenase.
• Chain: A
• Resolution: 1.9 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	FAD	A	I18 G19 G21 F22 S23 E43 A44 G50 T51 W52 N54 V62 D63 C64 Y69 R114 V115 A145 V146 R337 F390 Y436 N446 G447	I10 G11 G13 F14 S15 E35 A36 G42 T43 W44 N46 V54 D55 C56 Y61 R106 V107 A137 V138 R319 F372 Y418 N428 G429

Gene Ontology

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UnboundLocalError

Python 3.6.8: /usr/bin/python3 Fri Feb 21 20:58:04 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)

   1444         else:

=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)

   1446     

   1447     uniprot_line=''

pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5j7x', asym_id = 'A', title = 'Structural and Catalytic Characterization of a Fungal Baeyer-Villiger Monooxygenase.'

 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5j7x', asym_id='A', title='Structural and Catalytic Characterization of a Fungal Baeyer-Villiger Monooxygenase.')

    839 

    840     if go:

=>  841         display_go(go,uniprot,pdbid,asym_id)

    842     return pubmed,uniprot

    843 

global display_go = <function display_go>, go = '0004499,0050660,0050661', uniprot = '', pdbid = '5j7x', asym_id = 'A'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004499,0050660,0050661', uniprot='', pdbid='5j7x', asym_id='A')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>